Category Archives: coral

[Coral-List] NMFS’ 90-day finding on petition to list 23 corals

Today the National Marine Fisheries Service published their 90-day finding
on a petition to list 23 coral species under the Endangered Species Act. The
23 corals are part of a wider set of 81 marine species the agency was
petitioned to list in July 2013. The finding determined that the available
information presents substantial scientific or commercial data or
information indicating that the petitioned action may be warranted for
three species (*Cantharellus noumeae, Siderastrea glynni*, and *Tubastraea
floreana*). We will initiate a status review of these species and we seek
information from interested parties and the public on the status, threats,
and conservation of these species. The public comment period opened today
and ends 24 December 2013. A 12-month finding on whether or not to propose
ESA listing for one or more of these three species is the next step in the
process.

We also determined that the petition did not present substantial
information indicating the petitioned actions may be warranted for the
remaining 20 species. These 20 species are: *Acropora roseni, Acropora
suharsonoi, Alveopora excelsa, Alveopora minuta, Ctenella chagius,
Hydnophora bonsai, Isopora togianensis, Lithophyllon ranjithi, Lobophyllia
serratus, Millepora boschmai, Millepora striata, Montipora setosa,
Parasimplastrea sheppardi, Pectinia maxima, Pocillopora fungiformis,
Porites desilveri, Porites eridani, Porites ornata, Rhizopsammia
wellingtoni, *and *Stylophora madagascarensis*. This ends the review
process for these 20 species.

The 90-day finding, petition, link to the online public comment site, and
other information are all available at:
http://www.nmfs.noaa.gov/pr/species/petition81.htm

best regards

Dwayne

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Dwayne Meadows, Ph.D.
Species of Concern National Program Coordinator
Endangered Species Division
Office of Protected Resources (F/PR3)
National Marine Fisheries Service
1315 East West Highway
Silver Spring, MD 20910
(301) 427-8467
FAX: (301) 713-4060
Dwayne.Meadows@noaa.gov
http://www.nmfs.noaa.gov/pr/species/concern/

Coral-List: Nova Southeastern University Report on Coral Spawning 2013

Hello all,
After the full moon in July, August, and September, researchers in 7 regions of the Caribbean (Mexico, Curacao, Belize, St. Thomas, Florida, Flower Gardens, Columbia) monitoring 9 coral species (A. cervicornis, A. palmata, A.. prolifera, Diploria/Pseudodiploria strigosa , Dendrogyra cylindrus, Montastraea/Orbicella franksi, M. annularis, M. faveolata, Montastraea cavernosa) for spawning activity. Overall it was a great year for Caribbean coral spawning.
For detailed information on location, spawning times, and environmental conditions, log into google docs and follow this link:

https://docs.google.com/spreadsheet/ccc?key=0AuCz7WiTRAnkdGNpZ1k1VGwwb1NUYjdXR3BrQ0k3a1E&usp=sharing

Please email me (nicole.fogarty@nova.edu) if you have any corrections or additional spawning observations. You can also join us on the “coral spawning research” facebook page for real time accounts of coral spawning events.

Nicole D. Fogarty, PhD
Assistant Professor
Nova Southeastern University
Oceanographic Center
8000 N. Ocean Drive
Dania Beach, FL 33004-3078
(954) 262-3630

ISME Journal via Coral-list: Bacterial profiling of White Plague Disease in a comparative coral species framework

The ISME Journal advance online publication 8 August 2013; doi: 10.1038/ismej.2013.127

Open–find complete paper with tables at:
http://www.nature.com/ismej/journal/vaop/ncurrent/full/ismej2013127a.html

Cornelia Roder1, Chatchanit Arif1, Till Bayer1, Manuel Aranda1, Camille Daniels1, Ahmed Shibl1, Suchana Chavanich2 and Christian R Voolstra1

1Red Sea Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
2Department of Marine Science, Faculty of Science, Chulalongkorn University, Reef Biology Research Group, Bangkok, Thailand

Correspondence: CR Voolstra, Red Sea Research Center, King Abdullah University of Science and Technology, Building 2, Room 2226, Thuwal 23955, Saudi Arabia. E-mail: christian.voolstra@kaust.edu.sa

Received 23 January 2013; Revised 19 June 2013; Accepted 1 July 2013
Advance online publication 8 August 2013

Abstract

Coral reefs are threatened throughout the world. A major factor contributing to their decline is outbreaks and propagation of coral diseases. Due to the complexity of coral-associated microbe communities, little is understood in terms of disease agents, hosts and vectors. It is known that compromised health in corals is correlated with shifts in bacterial assemblages colonizing coral mucus and tissue. However, general disease patterns remain, to a large extent, ambiguous as comparative studies over species, regions, or diseases are scarce. Here, we compare bacterial assemblages of samples from healthy (HH) colonies and such displaying signs of White Plague Disease (WPD) of two different coral species (Pavona duerdeni and Porites lutea) from the same reef in Koh Tao, Thailand, using 16S rRNA gene microarrays. In line with other studies, we found an increase of bacterial diversity in diseased (DD) corals, and a higher abundance of taxa from the families that include known coral pathogens (Alteromonadaceae, Rhodobacteraceae, Vibrionaceae). In our comparative framework analysis, we found differences in microbial assemblages between coral species and coral health states. Notably, patterns of bacterial community structures from HH and DD corals were maintained over species boundaries. Moreover, microbes that differentiated the two coral species did not overlap with microbes that were indicative of HH and DD corals. This suggests that while corals harbor distinct species-specific microbial assemblages, disease-specific bacterial abundance patterns exist that are maintained over coral species boundaries.
Keywords:

16S rRNA gene microarray; Gulf of Thailand; Pavona duerdeni; Porites lutea; coral disease; White Plague Disease (WPD)

Special thanks to Coral-list

Why I am Still Opposed to Widening and Deepening Key West Harbor to Accommodate Larger Cruise Ships by DeeVon Quirolo

Points to consider in the discussion of whether to vote for a feasibility study to widen and deepen Key West harbor:

The science has been indisputable for a long long time on the negative impacts of siltation and dredging on or near coral reefs. Corals are living permanent structures on the ocean bottom comprised of colonies of living polyps that need clear, clean nutrient free waters to thrive. Dredging creates fine sediment and silt that covers corals, preventing photosynthesis and resulting in massive mortality, especially for Elkhorn and Staghorn corals–which cannot slough it off as can other corals. Such sedimentation also reduces the ability of all marinelife, including tarpon and other fish that utilize this area for habitat, to survive.

Episodic storm activity may stir up sediment but the wave action of those storms can also remove loose particulate matter from areas of the ocean bottom. While storm activities have historically affected visibility in the harbor and at the reefs, they do not compare in scale to the massive, chronic, intense effects of outright removal of habitat and the smothering of living formations by tons of dredge sediments that would occur immediately in the harbor and at nearby downstream coral reefs if additional widening and deepening of Key West Harbor were to occur.

It is incredulous to me that anyone associated with protecting coral reefs would dispute this elementary fact of coral ecology. In addition, the health of sea grasses and myriad other marinelife that depend upon this habitat would be severely impacted, including endangered sea turtles and dolphins.

The Key West Harbor Reconnaisance Report published November 2010 noted that the harbor is included in the “critical essential habitat” for both Elkhorn and Staghorn corals under the Endangered Species Listing for them. There has not been one case of allowing removal of critical essential habitat from the Jacksonville Corps of Engineers office in the last 15 years.

It states: “Under the Endangered Species Act (ESA) of 1973; the threatened coral Acropora cervicornis (staghorn coral) and Acropora palmata (elkhorn coral) could be located adjacent to the channel in the areas proposed for expansion as this area is designated as critical habitat for these species. While it is possible to relocate the actual colonies of coral, the critical habitat would be permanently removed. It is highly likely that the removal of several acres of occupied designated critical habitat (habitat where the species has been shown to be able to flourish under baseline conditions) could be considered an adverse modification of critical habitat under Section 7 of the ESA. This would be Jacksonville District’s first adverse modification of critical habitat determination in the last 15 years. It is also unknown what reasonable and prudent alternatives and measures National Marine Fisheries Service (NMFS) would include in a biological opinion to avoid the project adversely modifying designated critical habitat, as required under Section 7 of the Act.* It is expected that resource agencies would oppose any channel modifications outside the existing footprint.”

So this whole feasibility study could be a huge waste of money because there are good reasons why a permit would never be issued for the project thereafter. Surely we can find a more sustainable use of $5 million dollars—how about some stormwater treatment for the island of Key West to improve water quality?

The feasibility study is an effort to calculate the possibility of further widening and dredging in a harbor that was deepened just five years ago. Underneath Key West lies a fresh water aquifer. There are upwellings of fresh water in the harbor today. A massive deepening and widening may have severe unintended consequences on the aquifer, that at a minimum could result in salt water intrusion of that fresh water lens.

The last harbor dredging project just a few years ago included a mitigation plan by the Florida Keys National Marine Sanctuary to remove corals from the harbor with the purpose of restoring the damage. Despite their best efforts, there have been only a few of those corals planted in an offshore boat grounding site. For the most part, there has been no successful effort to restore the extent of coral colonies that existed in this area prior to the last dredging. It is therefore highly unlikely that another dredging project will succeed in restoring the habitat removed via mitigation this time either. It is just a false hope that the loss of biodiversity will be anything but an ecological disaster for this otherwise already stressed part of Key West’s coral reef ecosystem.

Often these dredge projects result in in-filling thereafter due to storm activity. Key West may be saddled with a harbor that produces chronic sedimentation without regular repeated environmentally destructive maintenance dredging. This will in turn affect the downstream coral reefs with additional chronic smothering contaminated sediment.

The greater question really is: How much more can the surrounding coral reef ecosystem of the Florida Keys handle in terms of human impacts? Isn’t it enough to have a thriving hotel, tourism and real estate industry? Can’t we draw a line in the sand and say “enough is enough”? Already the hoards of cruise ship visitors denigrates the downtown section to the exclusive benefit of a few businesses while high-end resorts and guesthouses hold their breath that this low-end massive impact to our quality of life will not repel their key markets. What about those who still hope that Key West can be a magic island home–don’t they deserve consideration?

Craig and I would encourage every voter in Key West to vote NO on the feasibility study to dredge Key West harbor….. again.

DeeVon Quirolo

WLOX: Scientists studying impact of oil spill on coral reefs

http://www.wlox.com/

Posted: Jul 05, 2013 6:41 PM EST Updated: Jul 05, 2013 7:02 PM EST
By Steve Phillips – bio | email

GULFPORT, MS (WLOX) – Scientists studying the impact of the Deepwater Horizon oil spill invited the media aboard their research vessels Friday morning during a stop at the Port of Gulfport. Much of their research has focused on the oil spill’s impact on coral reefs in the Gulf.

The scientists gave a tour of their working laboratories aboard the Nautilus and the Endeavor. One researcher says the area around the Deepwater Horizon site is probably the best surveyed section of sea floor in the world. Still, three years after the oil spill, they are just beginning to discover the extent of its impact. The research vessel Nautilus uses a pair of remote operated vehicles or ROVs to explore coral reefs in deep water all around the oil spill site in the Gulf.

“We’ve been going back and taking pictures of the same corals, leaving physical markers on the floor, visiting the exact same coral colonies again and again, every three to four months since the spill occurred,” said Dr. Erik Cordes, the chief scientist aboard. Early images showed definite damage to the corals near the Deepwater Horizon site. The follow-up study on the health of the coral continues with varying results. “The story is really mixed. Some of them seem to be doing better than they were three years ago. And a lot of them seem to be doing much worse,” said Dr. Cordes.

While the Nautilus team focuses on coral, scientists aboard its sister research ship Endeavor are busy looking at what happens with oil and gas as it moves through the water column from sea floor to sea surface. “We’ve been doing experiments to see what happens to oil when it falls to the sea floor, when it rises up and what happens when the carbon from the oil enters organisms and move through the food web,” said Dr. Joseph Montoya, a professor of geology at Georgia Tech University. Large devices on deck allow the team to collect both sea floor sediment and water samples from around the oil spill site.

“We are interested in both what’s happening to the oil that was released during the Deepwater Horizon incident and in understanding what happens to oil in general terms so that we’ll be prepared if this were ever to happen again,” said Dr. Montoya.

“There are so many unanswered questions still to pursue. We’ve I think come up with some answers on this cruise, but I think we’ve come up with a lot more questions,” Dr. Cordes admitted.

The research consortium includes scientists from 17 different universities. The project headquarters is at the University of Mississippi.