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PLos ONE: Predictive Modeling of Coral Disease Distribution within a Reef System

http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009264

Gareth J. Williams1*, Greta S. Aeby2, Rebecca O. M. Cowie1, Simon K. Davy1*

1 School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand, 2 Hawaii Institute of Marine Biology, Kaneohe, Hawaii, United States of America

Abstract 

Diseases often display complex and distinct associations with their environment due to differences in etiology, modes of transmission between hosts, and the shifting balance between pathogen virulence and host resistance. Statistical modeling has been underutilized in coral disease research to explore the spatial patterns that result from this triad of interactions. We tested the hypotheses that: 1) coral diseases show distinct associations with multiple environmental factors, 2) incorporating interactions (synergistic collinearities) among environmental variables is important when predicting coral disease spatial patterns, and 3) modeling overall coral disease prevalence (the prevalence of multiple diseases as a single proportion value) will increase predictive error relative to modeling the same diseases independently. Four coral diseases: Porites growth anomalies (PorGA), Porites tissue loss (PorTL), Porites trematodiasis (PorTrem), and Montipora white syndrome (MWS), and their interactions with 17 predictor variables were modeled using boosted regression trees (BRT) within a reef system in Hawaii. Each disease showed distinct associations with the predictors. Environmental predictors showing the strongest overall associations with the coral diseases were both biotic and abiotic. PorGA was optimally predicted by a negative association with turbidity, PorTL and MWS by declines in butterflyfish and juvenile parrotfish abundance respectively, and PorTrem by a modal relationship with Porites host cover. Incorporating interactions among predictor variables contributed to the predictive power of our models, particularly for PorTrem. Combining diseases (using overall disease prevalence as the model response), led to an average six-fold increase in cross-validation predictive deviance over modeling the diseases individually. We therefore recommend coral diseases to be modeled separately, unless known to have etiologies that respond in a similar manner to particular environmental conditions. Predictive statistical modeling can help to increase our understanding of coral disease ecology worldwide.

Environment, Science & Technology: Nitrogen Isotopic Records of Terrestrial Pollution Encoded in Floridian and Bahamian Gorgonian Corals by O. Sherwood, B.E. Lapointe, M. Risk, A. Jamieson

http://pubs.acs.org/doi/abs/10.1021/es9018404

Owen A. Sherwood*, Brian E. Lapointe, Michael J. Risk§ and Robyn E. Jamieson
Department of Biology, Memorial University of Newfoundland, 300 Prince Phillip Avenue, St. John’s, NL, A1B3X9, Canada; Harbor Branch Oceanographic Institute at Florida Atlantic University, 5600 US 1 North, Fort Pierce, Florida 34946; School of Geography and Earth Sciences, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4K1, Canada; and Fisheries & Oceans Canada, Ecological Sciences Section, P.O. Box 5667, 80 East White Hills Road, St. John’s NL A1C5X1, Canada
Environ. Sci. Technol., 2010, 44 (3), pp 874–880
DOI: 10.1021/es9018404
Publication Date (Web): January 7, 2010
Copyright © 2010 American Chemical Society

Abstract

Stable nitrogen isotope (δ15N) analysis has proven an effective “fingerprint” of sewage contamination in coral reef environments; however, short-term variability in nitrogen cycling and isotopic fractionation may obscure long-term trends. Here, we examine δ15N signatures in the organic endoskeletons of long-lived (20−40 years) gorgonian corals. Specimens were collected from relatively pristine reefs off Green Turtle Cay, Bahamas, and from reefs off southeast Florida heavily impacted by multiple sources of anthropogenic nitrogen. The δ15N of the most recently grown skeleton (branch tips) ranged from +2 to +3 ‰ at Green Turtle Cay, and +4.5 to +10 ‰ off Florida. These values closely match the δ15N of macroalgae collected from the same locations, indicating that gorgonian corals are isotopically similar to primary producers, and therefore suitable for assessing sources of dissolved inorganic nitrogen. Differences in the δ15N between younger and older skeleton indicated an overall decline of −0.34 ± 0.06 ‰ (1 s.e) over the last 20 − 40 years at Green Turtle Cay, reflecting a possible increase in nitrogen fixation and/or atmospheric deposition of anthropogenic nitrogen. Off southeast Florida, there was an overall increase in δ15N over the same time period, reflecting increasing wastewater discharges from the rapidly growing population. These results highlight the usefulness of δ15N recorded in gorgonians and other long-lived organisms in assessing spatiotemporal patterns of nitrogen sources to coastal marine environments.

 

 

 

 

Harmful Algae: Ecology and nutrition of invasive Caulerpa brachypus f. parvifolia blooms

Harmful Algae  Volume 9, Issue 1, January 2010, Pages 1-12

Ecology and nutrition of invasive Caulerpa brachypus f. parvifolia blooms on coral reefs off southeast Florida, U.S.A.

by Brian E. LapointeCorresponding Author Contact Information, a, E-mail The Corresponding Author and Bradley J. Bedforda

aCenter for Marine Ecosystem Health, Harbor Branch Oceanographic Institute, Florida Atlantic University, 5600 U.S. I North, Fort Pierce, FL 34946, USA

Received 18 August 2008; 

revised 2 June 2009; 

accepted 3 June 2009. 

Available online 11 June 2009.


Abstract

Coral reefs off southeast Florida have experienced an unprecedented succession of invasive chlorophyte blooms over the past two decades, most recently the non-native Caulerpa brachypus f. parvifolia. To better understand the ecology and nutrition of the C. brachypus invasion, we monitored benthic cover, water column dissolved inorganic nutrients, tissue C:N:P ratios and stable nitrogen isotopes (δ15N) of C. brachypus and native chlorophytes (Caulerpa racemosa, Caulerpa verticillata, Caulerpa mexicana, Codium isthmocladum) quarterly at two reef sites – the Princess Anne (PA) and North Colonel’s Ledge (NCL) – in 2003–2004. The PA site was influenced by stormwater discharges from the Lake Worth inlet whereas NCL was farther distant from these discharges. Between winter and spring of 2003, C. brachypus became the dominant benthic chlorophyte, expanding to >60% cover at both PA and NCL. Following cold temperatures (13 °C) associated with strong upwelling and high nitrate concentrations (21 μM) at NCL in July 2003, C. brachypus cover decreased, suggesting that upwelling can stress growth of this tropical alga. Mean ammonium (0.60 μM), nitrate (2.7 μM) and DIN (3.2 μM) concentrations were high for coral reef environments. Low mean C:N ratios of not, vert, similar13 in C. brachypus at both PA and NCL indicated little, if any, N-limitation compared to higher C:N ratios (up to 24) and greater N-limitation in native chlorophytes. Despite a relatively high mean SRP concentration (0.21 μM), mean N:P ratios of not, vert, similar39 in C. brachypus and other chlorophytes at PA and NCL suggested that these blooms were P-limited. Multiple lines of evidence support the hypothesis that land-based nutrient sources fueled the C. brachypus invasion. First, more persistent blooms of C. brachypus at PA compared to NCL correlated with significantly lower tissue C:P and higher δ15N values (wet season) at PA, the site most directly influenced by land-based stormwater runoff. Second, C:N, C:P, and δ15N values of C. brachypus correlated with seasonal patterns of rainfall and stormwater runoff. Third, δ15N values of C. brachypus and other chlorophytes decreased at NCL following strong upwelling in July 2003, confirming that upwelled nitrate was not the cause of the elevated δ15N values observed in these blooms. Lastly, the mean δ15N values of C. brachypus and other chlorophytes off southeast Florida (+4.9‰) were in the range of sewage nitrogen and significantly higher than values (+1.2‰) for reference chlorophytes in the Abacos, Bahamas, an area that experiences relatively little sewage input.

Keywords: Caulerpa brachypus; Coral reef; Eutrophication; Invasive; Macroalgae; Nitrogen; Non-native; Phosphorus

Center for Biological Diversity: EPA Evaluates Ocean Acidification Acidification as a Threat to Water Quality

http://www.biologicaldiversity.org/news/press_releases/2009/ocean-acidification-04-14-2009.html

For Immediate Release, April 14, 2009

Contact: Miyoko Sakashita, Center for Biological Diversity, (415) 436-9682 x 308 or (510) 845-6703 (cell)

EPA Evaluates Ocean Acidification as a Threat to
Water Quality Under Clean Water Act;

Action Marks First Step Toward Regulation of
Carbon Dioxide Emissions Under the Clean Water Act

SAN FRANCISCO— The United States Environmental Protection Agency announced steps to protect U.S. waters from the threat of ocean acidification under the Clean Water Act. Today, EPA issued a notice of data availability to be published in the Federal Register that calls for information and data on ocean acidification that the agency will use to evaluate water-quality criteria under the Clean Water Act.

The notice responded to a formal petition and threatened litigation from the Center for Biological Diversity that sought to compel the agency to impose stricter pH criteria for ocean water quality and publish guidance to help states protect American waters from ocean acidification. EPA’s notice marks the first time that the Clean Water Act will be invoked by the agency to address ocean acidification.

“Ocean acidification is likely the greatest threat to the health of our oceans and is occurring at a frightening rate,” said Miyoko Sakashita, an attorney with the Center for Biological Diversity’s oceans program. “The federal government has finally acknowledged that ocean acidification is a threat; now it must take the next step and fully implement the Clean Water Act to protect our nation’s waters from ‘the other CO2 problem.’ ”

EPA’s water-quality criteria are relevant to preventing ocean acidification because they are the measure against which many states gauge the need to impose regulations on pollution. The notice states that EPA’s “recommended criteria provide guidance to States and authorized Tribes in adopting water quality standards that ultimately provide a basis for controlling discharges or releases of pollutants.” Here, that could eventually translate into controls on CO2.

The oceans absorb CO2 to the tune of 22 million tons each day, and this changes seawater chemistry, causing it to become more acidic. Ocean acidification is emerging as a primary threat to our oceans. To prevent the worst impacts of ocean acidification, CO2 emissions will need to be reduced from current levels, requiring immediate regulatory action.

Ocean acidification is degrading seawater quality, with adverse impacts on marine ecosystems. The primary known consequence of ocean acidification is that it impairs the ability of marine animals to build and maintain their protective shells and skeletons. For example, ocean acidification threatens to erode away coral reefs within our lifetime. Nearly every marine animal with a shell is vulnerable to the impacts of ocean acidification. According to the notice, “[i]mpacts to shellfish and other calcifying organisms that represent the base of the food web may have implications for larger organisms that depend on shellfish and other calcifying organisms for prey.”

In 2007, the Center filed a formal petition asking EPA to impose stricter pH criteria for ocean water quality and publish guidance to help states protect U.S. waters from ocean acidification. The federal Clean Water Act requires the EPA to update water-quality criteria to reflect the latest scientific knowledge. Since the agency developed the pH standard back in 1976, an extensive body of research has developed on the impacts of carbon dioxide on the oceans. Now, EPA has agreed to evaluate this pH criterion in light of the new information on ocean acidification.

“We must take immediate action to address ocean acidification or the impacts will be catastrophic,” said Sakashita. “Fortunately, we need not wait for new legislation addressing CO2 emissions, as the Clean Water Act already provides us with important tools to confront this problem.”

EPA is accepting data and information on ocean acidification for 60 days. If the EPA strengthens the pH water-quality criterion for oceans, then the Clean Water Act requires states to adopt a water-quality standard at least as protective as the one established by the EPA. Here, stronger water-quality standards for pH could translate into measures that regulate CO2, which is causing ocean acidification.

More information is available from the Center for Biological Diversity at http://www.biologicaldiversity.org/campaigns/ocean_acidification/index.html.

The Center for Biological Diversity is a nonprofit conservation organization with 200,000 members and online activists dedicated to protecting endangered species and wild places. www.biologicaldiversity.org

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Reefcheck: Fewer Fish in Caribbean Reefs

 

Reef Check Caribbean Fish Decline

Wednesday, Apr 8, 2009 6:43AM / Standard Entry
FEWER FISH IN CARIBBEAN REEFS
Nils Bruzelius- The Washington Post

Populations of both large and small fish have been declining sharply across the Caribbean in the past 10 years, say researchers, who combined data from 48 studies of 318 coral reefs conducted over more than 50 years.

The data show that fish “densities” that had held steady for decades began to drop significantly around 1995, a trend not reported previously. Although overfishing has long taken a toll on larger species, the drop in smaller species that are not fished indicates that other forces are at work, said author Michelle Paddack of Simon Fraser University in Canada.

Drastic losses in coral cover and changes in coral reef habitats, driven by warming water temperatures and coral diseases, as well as sediment and pollution from coastal development could be among the factors. Overfishing may also have secondary effects by removing species that help keep reefs free of harmful algae.

“All these factors are stressing the reefs and making them less able to recover from disturbances such as hurricanes, which also seem to be occurring more frequently,” Paddack said in a statement.

Paddack and her colleagues reported last week in the journal Current Biology that fish densities have been declining by 2.7 percent to 6 percent every year all across the Caribbean.

“If we want to have coral reefs in our future,” the researcher said, “we must ensure that we reduce damage to these ecosystems,” by such personal measures as not eating species that are in decline and by pushing lawmakers and resource managers for changes in how coral habitats are sustained and protected.